BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B07LP1|AL428851
(911 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1777 1790 0.0
3x_Contig1186 168 1e-41
>3x_Contig1777
Length = 26319
Score = 1790 bits (903), Expect = 0.0
Identities = 909/911 (99%)
Strand = Plus / Plus
Query: 1 tttcttgagctattggtataaatatatccggtctttattagttatagataatagcagtca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14113 tttcttgagcaattggtataaatatatccggtctttattagttatagataatagcagtca 14172
Query: 61 aaaggttcctgtttccccaaagaaaatataacagcgtgtgatttgctaacaaagctcgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14173 aaaggttcctgtttccccaaagaaaatataacagcgtgtgatttgctaacaaagctcgac 14232
Query: 121 tgggtactctaatacaactaaacaaaaacaatacttcaagtattaactacaagaattgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14233 tgggtactctaatacaactaaacaaaaacaatacttcaagtattaactacaagaattgtc 14292
Query: 181 aggcatgtttctttatatgtttctcttttgtaactgttaaaatattgaacatgttgtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14293 aggcatgtttctttatatgtttctcttttgtaactgttaaaatattgaacatgttgtcca 14352
Query: 241 ctttcgatttttggacttgaggaaggacagacaacatcgggtgaaaaatgaggtgtgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14353 ctttcgatttttggacttgaggaaggacagacaacatcgggtgaaaaatgaggtgtgtga 14412
Query: 301 gcctggtacatgtgacagaggcagggtaatgaaattactaggacagcgacaagagaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14413 gcctggtacatgtgacagaggcagggtaatgaaattactaggacagcgacaagagaagct 14472
Query: 361 attattcatagaacgaacgacaatttaggattatgctaccgtagtctgcaaggaaacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14473 attattcatagaacgaacgacaatttaggattatgctaccgtagtctgcaaggaaacttc 14532
Query: 421 taataggtatttgggatagagagggattagtgtagttatttgtgcgtttatatgttttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14533 taataggtatttgggatagagagggattagtgtagttatttgtgcgtttatatgttttat 14592
Query: 481 atagaaatattactattaagaaaagagcccatatatgtgtgttatcttattcatcgacgt 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 14593 atagaaatattactattaagaaaagagcccatatatgtgtgtaatcttattcatcgacgt 14652
Query: 541 actctcctgttcttgaaagcattttcactgcagagatttaacgtcatttctgaatctctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14653 actctcctgttcttgaaagcattttcactgcagagatttaacgtcatttctgaatctctt 14712
Query: 601 ttcaacagcatccaagaattcgtcggtgttcacataacttgatctgtcagtgttaccaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14713 ttcaacagcatccaagaattcgtcggtgttcacataacttgatctgtcagtgttaccaca 14772
Query: 661 ggcaagggccaaatctttggtcatgataccgtcttcttggacagtgttcaaagtggattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14773 ggcaagggccaaatctttggtcatgataccgtcttcttggacagtgttcaaagtggattt 14832
Query: 721 ttccaacaagttggcaaattcgacgacttctggagtgttgtctagttcacctctcttggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14833 ttccaacaagttggcaaattcgacgacttctggagtgttgtctagttcacctctcttggc 14892
Query: 781 caaacctctagtccaagcgaagatggaagcgatggagtttgttgaggtttctttaccctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14893 caaacctctagtccaagcgaagatggaagcgatggagtttgttgaggtttctttaccctg 14952
Query: 841 ttggtattgtctgtagtgtctagtgacggtaccgtgagcagcttcactttcgaaggcctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14953 ttggtattgtctgtagtgtctagtgacggtaccgtgagcagcttcactttcgaaggcctt 15012
Query: 901 accgtctgggg 911
|||||||||||
Sbjct: 15013 accgtctgggg 15023
>3x_Contig1186
Length = 4633
Score = 168 bits (85), Expect = 1e-41
Identities = 115/125 (92%)
Strand = Plus / Plus
Query: 785 cctctagtccaagcgaagatggaagcgatggagtttgttgaggtttctttaccctgttgg 844
||||| ||||||||||| || || ||||| |||||||| |||||||||||||||||||||
Sbjct: 3107 cctctggtccaagcgaaaatcgaggcgatcgagtttgtcgaggtttctttaccctgttgg 3166
Query: 845 tattgtctgtagtgtctagtgacggtaccgtgagcagcttcactttcgaaggccttaccg 904
| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3167 tgttgtctgtaatgtctagtgacggtaccatgagcagcttcactttcgaaggccttacca 3226
Query: 905 tctgg 909
|||||
Sbjct: 3227 tctgg 3231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6936
Number of Sequences: 1807
Number of extensions: 6936
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)